BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A11SP1|AL428320
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig723 1785 0.0
>3x_Contig723
Length = 3342
Score = 1785 bits (900), Expect = 0.0
Identities = 901/902 (99%)
Strand = Plus / Minus
Query: 1 ttgccttctttgcctacttctcttcttctcttctcttctcttctcttcttctctttccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 ttgccttctttgcctacttctcttcttctcttctcttctcttctcttcttctctttccac 1438
Query: 61 tcgtttaccatatttattattagaatcaagatgtaaagagctggcaggctgcagttcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 tcgtttaccatatttattattagaatcaagatgtaaagagctggcaggctgcagttcgtt 1378
Query: 121 acattctccattagggatacatgaaaaaatacatatagtaaataaaacaagggcgtacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 acattctccattagggatacatgaaaaaatacatatagtaaataaaacaagggcgtacaa 1318
Query: 181 taagctaccgcaccttgctatttcgggcaacaccaaggcatagaatccgttggtttggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 taagctaccgcaccttgctatttcgggcaacaccaaggcatagaatccgttggtttggat 1258
Query: 241 gtgttctcacttcgttggttctgccctacccgataagttagagaaatgatgtatagtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1257 gtgttctcacttcgttggttctgccctacccgataagttagagaaatgatgtatagtgat 1198
Query: 301 gatataggggagaccaaaatgagggaaagagggaaatcgttatgaacgaaaccagggtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1197 gatataggggagaccaaaatgagggaaagagggaaatcgttatgaacgaaaccagggtaa 1138
Query: 361 caatgagcgatgaccacgtctcccaaggttgtcgttttaggatattgaaccaggaaatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 caatgagcgatgaccacgtctcccaaggttgtcgttttaggatattgaaccaggaaatgc 1078
Query: 421 tagaggctggaatggcgtaatggaaccgtgcactgtggtcgaaggggatgtttattcttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 tagaggctggaatggcgtaatggaaccgtgcactgtggtcgaaggggatgtttattcttg 1018
Query: 481 cagtttgggaaacgtctcgtgataggctctcacaacataacgggcaaacgcctctaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 cagtttgggaaacgtctcgtgataggctctcacaacataacgggcaaacgcctctaagaa 958
Query: 541 ataccttgcttcttattaacccccagtagcttagtgggcggaccaggcggtctgcgcgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 ataccttgcttcttattaacccccagtagcttagtgggcggaccaggcggtctgcgcgaa 898
Query: 601 ttgccagaaaaccgaagttgtgacaaataaaaaaaagttactttctcggcagttcgaatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 ttgccagaaaaccgaagttgtgacaaataaaaaaaagttactttctcggcagttcgaatc 838
Query: 661 tcaaatgatgaataactatgcgtgaacaatctctgattgatacaaataacgcttgtatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 tcaaatgatgaataactatgcgtgaacaatctctgattgatacaaataacgcttgtatca 778
Query: 721 aaggattaaaaaacatgttgccttccttctgaattgacttataagtaaaaacctctattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aaggattaaaaaacatgttgccttccttctgaattgacttataagtaaaaacctctattt 718
Query: 781 tattctttttttacaattaattaccatatcccagcgagtdaggccaattatggacaccat 840
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 717 tattctttttttacaattaattaccatatcccagcgagtaaggccaattatggacaccat 658
Query: 841 tgaaccagattttattgaaactgagactggtaacggttacggttccactttatccacttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tgaaccagattttattgaaactgagactggtaacggttacggttccactttatccacttc 598
Query: 901 tg 902
||
Sbjct: 597 tg 596
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7514
Number of Sequences: 1807
Number of extensions: 7514
Number of successful extensions: 89
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)